2nd Symposium du Réseau de Biologie des Systèmes de Sorbonne Université
Development session (chair : Frédérique Peronnet)
9h00 – Dynamics and lineage topology of hematopoiesis studied by fate mapping of stem cells in vivo
Thomas Höfer, invited speaker (BioQuant, Heidelberg University, Germany)
9h30 – Evolution of a fly’s early body plan explained with dynamic models Anton Crombach, invited speaker (Equipe Networks In Evolutionary Systems, CIRB, Collège de France, Paris)
10h00 – A viscoplastic model of tip-growth for the brown alga Ectocarpus Hervé Rabillé (Integrative Biology of Marine Models, Roscoff, UPMC)
10h20 – Pause Café et session poster Physiology session (chair : Hédi Soula)
10h50 – Multi scale dynamics in retinal waves
Bruno Cessac, invited speaker (BIOVISION team, INRIA Sophia Antipolis- Méditerranée)
11h20 – A monolithic fluid-structure interaction solver to simulate valve motion in veins of inferior limbs during walking
Chen-Yu Chiang (REO Team, INRIA/LJLL, UPMC)
11h40 – DynamicsHeterogeneity of T lymphocytes, Depending on Cell Differentiation, Age, and Genetic Background
Véronique Thomas-Vaslin (Equipe i2, laboratoire i3 UMRS 959, UPMC)
12h00 – Pause déjeuner et session poster
Networks session (chair: Bruno Delord)
14h00 – Pathifier : a robust tool to infer pathway deregulation based on expression data
Maharajah Ponnaiah (IBPS, UMR 7622, Biologie du développement, UPMC)
14h20 – Gregory Batt, invited speaker (InBio team, Institut Pasteur/INRIA, Paris)
14h50 – Inferring causal structure in regulatory networks from a mixture of observational and intervention experiments – Laplace approximation, MCMC, and parallel tempering
Grégory Nuel (LPMA, UPMC)
15h10 – Accessible chromatin landscape reveals a proliferative osteoprogenitor transcriptional program in bone marrow mesenchymal stromal cells from patients with primary myelofibrosis
Christophe Desterke (Faculty of medicine, University of Paris-Sud, Orsay)
15h30 – Pause Café et session poster Evolution session (chair: Philippe Lopez)
Evolution session (chair: Philippe Lopez)
16h00 – Beware batch culture: In silico experimental evolution predicts it favors adaptive diversification
Carole Knibbe, invited speaker (INRIA at Lyon / CarMeN at INSA Lyon)
16h30 – Fingerprints of epistasis from models of population genetics Igor Rouzine (LCQB, UPMC)
16h50 – A multi-scale coevolutionary approach to predict protein-protein interactions
Martin Weigt (LCQB, UPMC)
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